Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015859277.1_cds_XP_016514251.1_26719
CDS Infomation

[gene=LOC107831049] [db_xref=GeneID:107831049] [protein=B3 domain-containing protein Os07g0563300-like isoform X3] [protein_id=XP_016514251.1] [location=complement(join(10362..11122,11252..11322,12957..13070,13179..13231,14826..15218,15535..15614,15902..16076,16941..17037,17276..17615,17754..18033,25021..25119,25292..25373,27755..27888))] [gbkey=CDS]
Sequence

ATGTCGTCGTCCGCTGCGCCGTCGTCGGCTACGAAGGTTTGCTTCAACACCAACTGCAAC
CAATTTATTGAACGGCCGAAGAAAGGTTGGCGCCGTCGCACCGGCGAGTTCGCTGACCTT
TGTGATCGTTGCGCTTCTGCTTATGATGATGGCAAGTTTTGTGAGACTTTTCACCTCAAA
ACTTCTGGATGGAGATCTTGTGAGTCTTGTGGAAAGCAAATTCATTGTGGATGCATTGTC
TCTTTCCATACATTCGTTCTGTTGGATGCTGGAGGTATTGAGTGCTTATCCTGTGCAAGG
AAAAGTTTTATTTTGCCTGAAAGAATTAAAGACGTCAATAATTGGAATCCAATAGCTGGT
TCTGGTCCTGTTCCATGGAGACAAGCACCAAGTTTATTTAATGGTTCCGCCATTCAAAAT
GAGTTGCAGCCCAGGACACCCTTTCTTGATGCCACAGGCAGCGTCGACAGACTTTGTCTT
GGTGAGAGACCGTCTGCCTTGTCCTCCGACAACAGCAGGAAGGACTCTTGTGAAAAGTTG
ATGAATGGAAAGCTGAAGATTGGTGTACCAGGAACACTTGAAAATGGATATGCTGGTCTT
AATCATGAGGAGCCCCCTAAGTCTTGTATAAGTGGTCCACCACAATTATCTTATGCAAAG
AATGATCTTTCTGCTCCCAGTTTTTCTTTGACTATCGGTTCTTCTTGCAAAAATGAACCA
ACTGATCACAGTAAGGTGTCTATTAGTCTCCAACAACAAACCACACTTTCGACTCCATTG
GGGAAGCAGCTTGGTGGTCATGCTACAGTGGATTACGCTGGAGAGACTCAAGTCCGCAAT
TCGAAAACCCGTGTAGATGGGAGAGGAAAGCATCATTTACTTCCTCGTTACTGGCCTCGC
ATAACGGATGAAGAACTACAACAAATATCTGGAGACTCAAATTCTGTAATTACTCCTTTG
TTTGAAAAGATGCTAAGTGCTAGTGACGCTGGCAGGATAGGACGGTTAGTATTGCCGAAG
AAATGTGCTGAGGCCTATTTTCCACCAATTTCTAATCCAGAAGGGCTGCCTCTCAAGGTG
CAAGATCTGAAAGGGAAGGAATGGATGTTTCAGTTCAGATTTTGGCCTAATAATAACAGT
CGTATGTATGTCTTGGAAGGGGTGACTCCTTGTATACAGTCGATGCAATTGCAAGCAGGT
GACATAGTAACATTCAGTAGGATAGAGCCAGAAGGAAAGTTGGTCATGGGGTGCAGAAAG
GCCTCAACTACTCTTACAGCAGATCAGGGAAGTGAAGCTTGCAGTAACAGTAACGGTGTT
GTTACAAATGGGAATGTCAATACTAAAAGTACCAAGTTCTCTGAAGAAGTTCTGGCAAAT
TCTACTAAAAAAGGCTTTTCATCAACCACTCATGTTGCTCCAGCAGATTCAACAATTGGC
TGGGCTGAAACTAAATTGTCCGATGATATGGCTATGGAATTTTTAGGAAACAATCGTTCT
ATTCCTTGTAAGAGGAAGAGTAGCACCCTGGGTTCAAAAAGCAAACGCTTGAGGATTGAC
AATGAGGACTTAGTAGAGCTGAAGGTCACAGTGGTGCAAGCCCAAGGGTTGATGCGTCCA
CCTTCAAGTGATGCTCCTACAGTAATCGTGATAGAAGGCTGTGAGTTTGAAGAATACGAG
CAGGATGCACCAATTATTGGCAGGCCTGCAATCCCTTCTGTGGATCATTTGGGTGAAAAA
ATACAATGGGTACAATGTGAGGACTGTTTCAAGTGGCGAAAAGTTCCTGACAGTGCTCTC
CTTCCATCAAGATGGACTTGTTCAGAAAACTCATGGGACTCCGAGAGGTCTGTGTGCTCG
GCAGATCAAGAATTAACTGCAGATCATCTGCGAGACCTCCTGCCTCGTATTAATAAAGCT
GCCAAGAAAATGAAGGCTTCTAAACAGGAAACAGACGTTGAGGCTCTGGATGGGCTTGAT
GCACTTGCTAATCTCGCTATTCTAGACGAGGGAGAGACTCTTCCAGCATCATCACAGGCC
ACGACGAAGCACCCACGTCATAGACCTGGGTGTACCTGCATTGTCTGCATTCAGCCCCCA
AGTGGAAAAGGTCCTAAGCACAAGCAATCATGTGATTGTATCGTCTGTAAATCAGTAAAG
CGTCGTTTCAAAACATTGATGCTGAAGCGTGAAAAAAAGTTATCAGAGAAAGAAGCAGAA
GCTGCTTGTCAAAAACTGCAGCCACAATTGGCTGGACAACTGCTTGATGCTGGTGACATT
CAAGAATCTAATGATGACGCAGGGCATTTTAGCCCACAGCGGGGAGAGCTGAACAATGAG
GGTTATGCGGATGATCCCAATTACCCTAATGAGAAGAAATCTTCTGCTTTGCCATTTAAA
GGTGAAATTGACCTGAATGCTAAACCAGAGAGAGATGATGAGCTTTCACCAGGCTCTGAT
TCTGGCAGCATAATGCGCATACTCCAAGTTGCTGCAGAGCAATATGTCAGGCATTGTGAG
AATGGAAGTTTCACGGGTAATCATGAAAATGGAGATGGTACTGGAGAGACAAATCCGAAT
AATTGTGTTATTGTTGGTGGTACTAATCAAACTGATGTAGACCATAATAGGCCTTTATCT
ATAGGCACGGCTGCATCTTTGGCACCTAATGACCAGTAG

Peptide Sequence

PEP ID

XP_016514251.1
PEP Infomation

PREDICTED: B3 domain-containing protein Os07g0563300-like isoform X3 [Nicotiana tabacum]
Sequence

MSSSAAPSSATKVCFNTNCNQFIERPKKGWRRRTGEFADLCDRCASAYDDGKFCETFHLK
TSGWRSCESCGKQIHCGCIVSFHTFVLLDAGGIECLSCARKSFILPERIKDVNNWNPIAG
SGPVPWRQAPSLFNGSAIQNELQPRTPFLDATGSVDRLCLGERPSALSSDNSRKDSCEKL
MNGKLKIGVPGTLENGYAGLNHEEPPKSCISGPPQLSYAKNDLSAPSFSLTIGSSCKNEP
TDHSKVSISLQQQTTLSTPLGKQLGGHATVDYAGETQVRNSKTRVDGRGKHHLLPRYWPR
ITDEELQQISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPPISNPEGLPLKV
QDLKGKEWMFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDIVTFSRIEPEGKLVMGCRK
ASTTLTADQGSEACSNSNGVVTNGNVNTKSTKFSEEVLANSTKKGFSSTTHVAPADSTIG
WAETKLSDDMAMEFLGNNRSIPCKRKSSTLGSKSKRLRIDNEDLVELKVTVVQAQGLMRP
PSSDAPTVIVIEGCEFEEYEQDAPIIGRPAIPSVDHLGEKIQWVQCEDCFKWRKVPDSAL
LPSRWTCSENSWDSERSVCSADQELTADHLRDLLPRINKAAKKMKASKQETDVEALDGLD
ALANLAILDEGETLPASSQATTKHPRHRPGCTCIVCIQPPSGKGPKHKQSCDCIVCKSVK
RRFKTLMLKREKKLSEKEAEAACQKLQPQLAGQLLDAGDIQESNDDAGHFSPQRGELNNE
GYADDPNYPNEKKSSALPFKGEIDLNAKPERDDELSPGSDSGSIMRILQVAAEQYVRHCE
NGSFTGNHENGDGTGETNPNNCVIVGGTNQTDVDHNRPLSIGTAASLAPNDQ

Transcript Sequence

Gene sequence data has not been registered.